Find hotels in Marathon, FL from $75

Most hotels are fully refundable. Because flexibility matters.

Save 10% or more on over 100,000 hotels worldwide as a One Key member.

Search over 2.9 million properties and 550 airlines worldwide.

Check Marathon hotel prices

Tomorrow night
Next weekend

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Neighborhood
Neighborhood
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveler experience
Traveler experience

Compare 1,441 hotels, room rates, hotel reviews and availability. Most hotels are fully refundable.

Life in Paradise w/ Boat Slip at #1 Rated Resort in Marathon - Coral Lagoon
10.0 out of 10, Exceptional, (189)
"This was a great vacation for my daughter's 18 birthday with some friends and family. We saw manatees the first morning out back in the canal. There was always some type of animal in the very sheltered canal if you have a boat. We brought our pontoon boat and had a day of very bad weather. We never worried once because we could see the boat from the back porch (50 yards away) and the canal is very sheltered and nice. You have access to the ocean and the bay side as soon as you go around the...
Life in Paradise w/ Boat Slip at #1 Rated Resort in Marathon - Coral Lagoon
Beautiful Coral Lagoon #12 - Waterfront - Boat Slip & Heated Pool
10.0 out of 10, Exceptional, (122)
"This condo was perfect for our family and our boat! Well decorated and furnished and a great bunk room for the kids! So convenient to have the boat just feet from the back door and the heated pool was a perfect way to end the day! Convenient to everything in marathon but in a quiet community where we could relax. Easy access to the gulf and the Atlantic. We will definitely stay here again when we come back down"
Beautiful Coral Lagoon #12 - Waterfront - Boat Slip & Heated Pool
Villa 5034 on Duck Key Boat Slip available
10.0 out of 10, Exceptional, (1)
"The Villa was perfect for our vacation. Beautiful sunsets every night. Frank was very responsive to our questions. Would stay again"
The price is $259
$612 total
includes taxes & fees
May 13 - May 14
Villa 5034 on Duck Key Boat Slip available
Save an average of 15% on thousands of hotels when you're signed in
★Newly remodeled tropical townhome★ Private plunge pool close to fun activities
10.0 out of 10, Exceptional, (31)
"The property is very nice and immaculately cleaned. Well stocked and a great location. It was perfect for my husband & I, and our 2 teenage boys. Our only complaint is that it sits on the water, but you do not have any access. the access to the docks/walkway is completely closed off in all areas, so that was disappointing. But, we would absolutely return to the area and to this property."
★Newly remodeled tropical townhome★ Private plunge pool close to fun activities
Palm Villa SPECIAL April weekend dates includes Dock and Cabana Club
9.8 out of 10, Exceptional, (123)
"The owners are 5 star! The villa is conveniently located to the main Hawks Cay lodge as well as the Angler & Ale Restaurant and docks. The unit is clean, comfortable and accommodates 4 adults with everything you need for a relaxing, fun filled getaway. If you plan ahead, like we always do when coming to the Keys, I suggest you stop at Publix and stock up on any food, drinks and extras (shampoo, laundry detergent, dishwasher tabs, etc) that you may want while on property as it’s about a 25 min...
Palm Villa SPECIAL April weekend dates includes Dock and Cabana Club
Key Lime Cottage: A Stunning Duck Key Retreat with Private Dip Pool and Scenic Water Views!
9.8 out of 10, Exceptional, (41)
"Love Duck Key!"
Key Lime Cottage: A Stunning Duck Key Retreat with Private Dip Pool and Scenic Water Views!
2-BEDROOM 3 BATH 299nt + Pool on BLUE LAGOON. SLEEPS 6
9.6 out of 10, Exceptional, (32)
"Great property, excellent location, very well maintained. Enjoyed our stay, Marc was very easy to work with, excellent communication and very responsive. My only criticism is the bathrooms are a bit small, but everything else was perfect."
2-BEDROOM 3 BATH 299nt + Pool on BLUE LAGOON. SLEEPS 6
4 Bed 3 Bath Duck Key Sanctuary Villa W/ Private Pool & 35 Foot Dock - Sleeps 10
9.6 out of 10, Exceptional, (118)
"Beautiful property to enjoy a family Christmas. We had 9 people staying and everyone was comfortable with open layout and cozy furniture. Property was easy to find and the check in / out process was easy. The host was responsive to any questions. We’ve done a lot of VRBOs in a variety of locations, and this was by far the best stocked and most welcoming properties."
The price is $799
$1,488 total
includes taxes & fees
May 6 - May 7
4 Bed 3 Bath Duck Key Sanctuary Villa W/ Private Pool & 35 Foot Dock - Sleeps 10
Villa 5020 on Duck Key BOAT SLIP available
9.6 out of 10, Exceptional, (7)
"Unit was very clean and had everything we needed"
The price is $269
$623 total
includes taxes & fees
May 6 - May 7
Villa 5020 on Duck Key BOAT SLIP available
Tipsy Turtle: Luxurious Waterfront Villa on Duck Key with Stunning Views and Modern Upgrades!
9.6 out of 10, Exceptional, (12)
"House was just as pictured. Very clean with a beautiful view. Highly recommend!"
Tipsy Turtle: Luxurious Waterfront Villa on Duck Key with Stunning Views and Modern Upgrades!
KCB-access Private Cabana Club, Dock on Canal, PET Friendly, Pickle ball courts
9.6 out of 10, Exceptional, (68)
"We had a great time , property was very clean and comfortable. Beautiful well kept neighborhood .. enjoyed fishing on dock , had a manatee visit day 2 … always a plus !!"
KCB-access Private Cabana Club, Dock on Canal, PET Friendly, Pickle ball courts
Grassy Flats Resort & Beach Club
2.5 star property
9.4 out of 10, Exceptional, (155)
"I thought the food was great. Even had Foursquare rum, in the bar. Staff was very friendly and helpful, offered many recommendations for beaches and jet ski options. Swim with the Dolphins, is 5 min drive. Only thing i wasnt a fan of, was the tide would go out around 4pm, until 9pm. Leaving a not so great smell during that time. Obviously nothing they can do,but was mot great. Whwn tide was in,was very nice. The pier is nice at night toi."
The price is $336
$378 total
includes taxes & fees
Jun 3 - Jun 4
Grassy Flats Resort & Beach Club
Waterfront Duck Key Villa
9.4 out of 10, Exceptional, (55)
"We loved our stay. It was so clean and absolutely stunning. Would absolutely stay there again next trip!"
The price is $499
$1,013 total
includes taxes & fees
May 6 - May 7
Waterfront Duck Key Villa
Waterfront Duck Key Villa - Sleeps 6
9.4 out of 10, Exceptional, (30)
"We really enjoyed our stay! Lovely home with lots of space and perfect location."
Waterfront Duck Key Villa - Sleeps 6
Villa 5087 on Duck Key BOAT SLIP available
9.4 out of 10, Exceptional, (13)
"The place was very clean and very comfortable. The location was great and we had a wonderful stay. The kitchen had all the utensils needed to cook a meal or two."
The price is $299
$665 total
includes taxes & fees
May 6 - May 7
Villa 5087 on Duck Key BOAT SLIP available
Restful waterfront townhome with deck, great water views & washer/dryer
9.2 out of 10, Wonderful, (65)
"The location at Duck Keys is central to visiting the overall Keys."
Restful waterfront townhome with deck, great water views & washer/dryer
Knight's Key Suites
3.0 star property
9.0 out of 10, Wonderful, (1024)
"The room was very clean and you are across a restaurant so don’t need to drive anywhere unless you want to."
The price is $129
$167 total
includes taxes & fees
May 13 - May 14
Knight's Key Suites
Waterfront retreat with balcony views, kayak, SUP, central AC & washer/dryer
9.0 out of 10, Wonderful, (35)
"This area is great and the homes are nice with ample room and all the things you need. The good parts are the views are amazing, kitchen is nicely stocked, beds are comfy, no bugs, nice pillows and nice decor. If your looking for just a nice house to stay at this is a great spot. There were only a few minor issues with the space, the dish washer did not work, after 3 days of trying I somehow got it to run once. I had seen this issue on previous reviews so it gave me some concern that this was...
Waterfront retreat with balcony views, kayak, SUP, central AC & washer/dryer
Fairfield Inn & Suites by Marriott Marathon Florida Keys
2.5 star property
8.8 out of 10, Excellent, (1005)
"No comment "
The price is $189
$213 total
includes taxes & fees
May 27 - May 28
Fairfield Inn & Suites by Marriott Marathon Florida Keys
Glunz Ocean Beach Hotel & Resort
3.0 star property
8.8 out of 10, Excellent, (1000)
"The property is even nicer in person. I checked in before arriving which made it so much easier when we arrived. The lounge and pool area was kept up and very clean. "
The price is $197
$265 total
includes taxes & fees
May 9 - May 10
Glunz Ocean Beach Hotel & Resort
Don't see what you're looking for?
See all available properties in Marathon
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Marathon

Find the best Marathon areas and neighborhoods for the activities you enjoy most. Learn more about Marathon

More cheap stays in Marathon

Stay near popular Marathon attractions

Marathon Travel Info

Number of reviews
5,474
Best neighborhoods
Little Venice, Indigo Reef Marina Homes and Coral Lagoon
Accommodation
1,441 hotels
Highest price
$799
Lowest price
$75
Reasons to visit
Sombrero Beach, The Turtle Hospital and Sunset Park Beach
Hotels with nearby beaches
253
Hotels with outdoor pools
8

Price trends for hotels in Marathon

Less expensive
More expensive
This month
Next month
August
March
$197
$196
Month
Price
January
$302
February
$364
March
$372
April
$288
May
$197
June
$196
July
$213
August
$176
September
$192
October
$194
November
$229
December
$306
Price trend information excludes taxes and fees and is based on base rates for a nightly stay for 2 adults found in the last 7 days on our site and averaged for commonly viewed hotels in Marathon. Select dates and complete search for nightly totals inclusive of taxes and fees.

Frequently asked questions

What's the best place to stay in Marathon?

Courtyard by Marriott Faro Blanco Resort is a favorite with Expedia customers. This hotel offers 2 outdoor pools and 2 bars. Reviews from our site also recommend Seascape Resort & Marina and Bonefish Bay Motel as top options for your visit. See all available top hotels, or vacation rentals in Marathon.

What are some of the best vacation home rentals that Marathon has to offer?

Aqua Lodge Rentals At Coconut Cay: Visitors give good reviews to this Marathon vacation home rental, which is located near the beach and offers an outdoor pool, air-conditioning, and daily housekeeping to help you feel perfectly comfortable in your new surroundings. Kitchen amenities include a full-sized fridge, a stovetop, and a microwave. Some other homes for rent in Marathon include "Your own private resort" - Mockingbird Pointe - Waterfront, pool and dockage and Casa De La Playa Oceanfront the Key to the Beach and 3 kayaks included. See all vacation rentals in Marathon.

If I need to cancel my hotel reservation in Marathon, will I receive a refund?

Yes, most hotel room reservations are fully refundable as long as you cancel prior to the accommodation's cancellation deadline, which in most cases is within 24 or 48 hours of check in. If you have a non-refundable reservation, it might still be possible to cancel it and get a refund within a 24-hour period of booking. Filter your search by fully refundable to find flexible hotel deals in Marathon.

Where can I learn more about changing or cancelling my trip to Marathon?

For more details about picking new dates or cancelling your trip to Marathon, click here.

What's the best place to stay on a budget in Marathon?

Based on reviews, Faro Blanco Resort & Yacht Club is a popular hotel for our travelers who want a more economical choice, and features free WiFi and 2 outdoor pools. Other good choices to stay on the cheap include Kingsail Resort and Floating Sea Cove Resort & Marina. View all budget hotels in Marathon.

What's the best place to stay for a family vacation in Marathon?

Faro Blanco Resort & Yacht Club is a hotel with 2 outdoor pools and 2 restaurants, and it's a top choice on Expedia for families. Other good choices to stay with the kids include Hawks Cay Resort and Rainbow Bend Resort. Kids of all ages will also enjoy a visit to Crane Point Museum and Nature Center. Find more child-friendly accommodations in Marathon.

What's the best place to stay for a couple going to Marathon?

Faro Blanco Resort & Yacht Club is a favorite hotel for couples, and features premium bedding and 2 restaurants. Other good choices for a stay with your sweetheart include Isla Bella Beach Resort & Spa and Hawks Cay Resort. See all romantic hotels in Marathon.

What is the top LGBTQ-friendly accommodation in Marathon?

Hawks Cay Resort is a top LGBTQ-friendly hotel that features a marina and 5 outdoor pools. Fairfield Inn & Suites by Marriott Marathon Florida Keys and Hampton Inn Marathon - Florida Keys are other good options for your vacation. See all available hotels listed as LGBTQ-friendly in Marathon.

What's the best pet-friendly accommodation in Marathon?

Faro Blanco Resort & Yacht Club is a top dog-friendly hotel, and offers 2 restaurants and 2 outdoor pools for its human guests. Two other good options for you and your pet include Coconut Cay Resort & Marina and Kingsail Resort. See more pet-friendly hotel accommodations in Marathon.

Where is the best hotel to stay close to Sombrero Beach?

Faro Blanco Resort & Yacht Club is one of the top choices for your stay based on our traveler data, and this 4-star hotel offers a marina and 2 outdoor pools. It's located 1.8 mi (2.8 km) from Sombrero Beach. Another good option is Banana Bay Resort & Marina, located 1.6 mi (2.5 km) away.

What about the best place to stay near Seven Mile Bridge?

One of the top choices for your stay is Faro Blanco Resort & Yacht Club, located 3.2 mi (5.2 km) from Seven Mile Bridge, and this 4-star hotel offers a marina and 2 outdoor pools. Isla Bella Beach Resort & Spa and Captain Pip's at Knight's Key Inn are two other good options within a few miles.

What's the best place for a beach vacation in Marathon?

Isla Bella Beach Resort & Spa is a top beachfront hotel with 5 outdoor pools and a full-service spa, and it's located close to Sombrero Beach. Other good choices to stay near the beach include Hawks Cay Resort and Tranquility Bay Beachfront Hotel and Resort. See more stays near the beach in Marathon.

Recent reviews of Marathon hotels
Expedia verified reviews