$191 Cheap Flights from San Diego (SAN) to Juneau (JNU)

View $191 flight on Tue, Jun 3, 2025Opens in a new window

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Find available prices by choosing your travel dates.

Cheap Flights from San Diego to Juneau (SAN-JNU)

Prices were available within the past 7 days and start at $191 for one-way flights and $387 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Alaska Airlines
Tue, Jun 3 - Wed, Jun 4
SAN
San Diego
JNU
Juneau
$387 Roundtrip, found 2 days ago
$387
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Tue, Jun 3 from San Diego to Juneau, returning Wed, Jun 4, priced at $387 found 2 days ago
Alaska Airlines
Tue, Jun 3 - Wed, Jun 4
SAN
San Diego
JNU
Juneau
$392 Roundtrip, found 2 days ago
$392
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Tue, Jun 3 from San Diego to Juneau, returning Wed, Jun 4, priced at $392 found 2 days ago
Alaska Airlines
Tue, Jun 3 - Wed, Jun 4
SAN
San Diego
JNU
Juneau
$392 Roundtrip, found 2 days ago
$392
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Tue, Jun 3 from San Diego to Juneau, returning Wed, Jun 4, priced at $392 found 2 days ago
Alaska Airlines
Tue, Jun 3 - Wed, Jun 4
SAN
San Diego
JNU
Juneau
$397 Roundtrip, found 2 days ago
$397
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Tue, Jun 3 from San Diego to Juneau, returning Wed, Jun 4, priced at $397 found 2 days ago
Alaska Airlines
Wed, Jun 11 - Thu, Jun 12
SAN
San Diego
JNU
Juneau
$402 Roundtrip, found 5 days ago
$402
Roundtrip
found 5 days ago
Select Alaska Airlines flight, departing Wed, Jun 11 from San Diego to Juneau, returning Thu, Jun 12, priced at $402 found 5 days ago
Alaska Airlines
Wed, Jun 11 - Thu, Jun 12
SAN
San Diego
JNU
Juneau
$404 Roundtrip, found 5 days ago
$404
Roundtrip
found 5 days ago
Select Alaska Airlines flight, departing Wed, Jun 11 from San Diego to Juneau, returning Thu, Jun 12, priced at $404 found 5 days ago
Alaska Airlines
Wed, May 28 - Thu, Jun 5
SAN
San Diego
JNU
Juneau
$408 Roundtrip, found 2 days ago
$408
Roundtrip
found 2 days ago
Select Alaska Airlines flight, departing Wed, May 28 from San Diego to Juneau, returning Thu, Jun 5, priced at $408 found 2 days ago
Delta
Mon, Jun 9 - Mon, Jun 16
SAN
San Diego
JNU
Juneau
$430 Roundtrip, found 9 hours ago
$430
Roundtrip
found 9 hours ago
Select Delta flight, departing Mon, Jun 9 from San Diego to Juneau, returning Mon, Jun 16, priced at $430 found 9 hours ago
Hawaiian Airlines
Sat, May 24 - Mon, May 26
SAN
San Diego
JNU
Juneau
$453 Roundtrip, found 2 days ago
$453
Roundtrip
found 2 days ago
Select Hawaiian Airlines flight, departing Sat, May 24 from San Diego to Juneau, returning Mon, May 26, priced at $453 found 2 days ago
American Airlines
Wed, Aug 27 - Thu, Aug 28
SAN
San Diego
JNU
Juneau
$522 Roundtrip, found 3 days ago
$522
Roundtrip
found 3 days ago
Select American Airlines flight, departing Wed, Aug 27 from San Diego to Juneau, returning Thu, Aug 28, priced at $522 found 3 days ago
Flights from San Diego (SAN) to Juneau (JNU)
Origin airport
San Diego Intl.
Destination airport
Juneau Intl.
Airlines serving
Alaska Airlines, American Airlines, Delta
Roundtrip price
$386
Distance
1946 mi

San Diego to Juneau Flights

The cheapest times to fly from San Diego to Juneau

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from San Diego to Juneau are during the month of June. You can find some of the cheapest flights from San Diego to Juneau with Expedia's search tool and vast selection of airlines.

The best time to book a flight from San Diego to Juneau

Sunday is one of the best days to book for cheap flights from San Diego to Juneau: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

How to find cheap round-trip tickets from San Diego to Juneau

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from San Diego to Juneau in 2025. You can also book with separate airlines for your outbound and return journeys, from $191 one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap San Diego to Juneau flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

You could also save big by booking one of Expedia's vacation packages. Bundling together your San Diego to Juneau airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

*Terms apply.

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

Frequently asked questions

How much does a flight from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU) cost?
Discover the latest flight deals from SAN to JNU by entering your preferred travel dates and searching on Expedia. Easily compare prices by departure date if you have flexibility with your schedule and use handy filters to explore prices for your preferred journey. As a member of One Key™, our free loyalty program, you can use Price Tracking to watch fares and receive notifications if prices go up or down.
What is the cheapest month to fly from SAN to JNU?
The cheapest flights from SAN to JNU are usually during off-peak season, when demand is lower. To save money, avoid flying during public holidays, school breaks and major local events.
What is the cheapest airline that flies from SAN to JNU?
Use the filter tool on Expedia to compare airlines and find the cheapest carrier that’ll take you from SAN to JNU. Sort your results by “Price (lowest to highest)” to snap up a great deal.
How many flights per day from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU)?
There aren’t any daily nonstop flights from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU). But you can opt for flights with layovers. Filter your search results on Expedia to include one or two stops, and you’ll be cruising above the clouds before you know it.
What day of the week has the most flights from SAN to JNU?
You’ll usually find Tuesday the quietest day for flights, while Fridays tend to be the busiest.* However this can change from season to season and during public holidays or peak travel times.*Busiest/quietest day to travel is based on Expedia flight demand through January to December 2024.
What is the best time to fly from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU)?
Book a flight from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU) that takes off before 3 PM to reduce the risk of cancellations. Departures later than this have a 22% higher chance of being canceled, on average.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG’s global flight data platform.
Is it cheaper to buy a plane ticket from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU) last-minute?
Holding off until just before your departure to book your flight from SAN to JNU often results in higher prices. While you may come across some last-minute deals, they aren’t always guaranteed. Be flexible with your itinerary for a better chance of getting a bargain.
Is it cheaper to book a SAN to JNU flight and hotel package?
You can save money by booking a SAN to JNU flight and hotel package compared to booking separately. In fact, travelers could save hundreds of dollars by bundling with Expedia. And it’s easy to manage it all in one convenient place. Once you’ve chosen your preferred accommodations and flights, consider adding extras including tours, car rentals and activities.
Can I cancel or change the date of my flight from San Diego Intl. Airport (SAN) to Juneau Intl. Airport (JNU)?
If you booked your SAN to JNU flight in the last 24 hours, you may be able to cancel or modify it without any fees. Depending on the airline and the type of fare you purchased, additional charges may apply for changes beyond that time. Airline policies and contact information can be found in your itinerary or confirmation email. Or, go to our Customer Service portal for more details.

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*Available to One Key members.