Cheap Flights from San Diego (SAN) to El Nido (ENI)

Popular airlines from San Diego Intl. Airport (SAN) to El Nido (ENI)

Find available prices by choosing your travel dates.
Flights from San Diego (SAN) to El Nido (ENI)
Origin airport
San Diego Intl.
Destination airport
El Nido
Distance
7629 mi

San Diego to El Nido Flights

The cheapest times to fly from San Diego to El Nido

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from San Diego to El Nido are during the month of . You can find some of the cheapest flights from San Diego to El Nido with Expedia's search tool and vast selection of airlines.

The best time to book a flight from San Diego to El Nido

Sunday is one of the best days to book for cheap flights from San Diego to El Nido: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

How to find cheap round-trip tickets from San Diego to El Nido

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from San Diego to El Nido in 2025. You can also book with separate airlines for your outbound and return journeys, from one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap San Diego to El Nido flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

You could also save big by booking one of Expedia's vacation packages. Bundling together your San Diego to El Nido airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

*Terms apply.

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

Frequently asked questions

How much does a flight from San Diego Intl. Airport (SAN) to El Nido (ENI) cost?
Discover the latest flight deals from SAN to ENI by entering your preferred travel dates and searching on Expedia. Easily compare prices by departure date if you have flexibility with your schedule and use handy filters to explore prices for your preferred journey. As a member of One Key™, our free loyalty program, you can use Price Tracking to watch fares and receive notifications if prices go up or down.
What is the cheapest month to fly from SAN to ENI?
The cheapest flights from SAN to ENI are usually during off-peak season, when demand is lower. To save money, avoid flying during public holidays, school breaks and major local events.
What is the cheapest airline that flies from SAN to ENI?
Use the filter tool on Expedia to compare airlines and find the cheapest carrier that’ll take you from SAN to ENI. Sort your results by “Price (lowest to highest)” to snap up a great deal.
How many flights per day from San Diego Intl. Airport (SAN) to El Nido (ENI)?
You’ll have to catch a flight with a layover when traveling from San Diego Intl. Airport (SAN) to El Nido (ENI). There are no daily direct flights on this route. However, simply filter your search to include one or two stops to discover the best option for your trip.
What day of the week has the most flights from SAN to ENI?
Typically you’ll find the largest variety of flight choices on a Friday. Tuesdays are often the quietest.* However, this can vary depending on the airline, season and other factors.*Busiest/quietest day to travel is based on Expedia flight demand through January to December 2024.
What is the best time to fly from San Diego Intl. Airport (SAN) to El Nido (ENI)?
To land at El Nido (ENI) on time, book a flight that leaves San Diego Intl. Airport (SAN) before 3 PM. The likelihood of cancellations is 22% higher, on average, for departures after this hour.**Most reliable time of the day and month to travel recommendation is based on January through August 2024 flight status data sourced from OAG’s global flight data platform.
Is it cheaper to buy a plane ticket from San Diego Intl. Airport (SAN) to El Nido (ENI) last-minute?
Waiting until just before your trip to book a ticket from SAN to ENI generally means paying more. While you may find some last-minute deals, they’re not always guaranteed. Allow some flexibility in your schedule for a better chance of scoring a bargain.
Can I cancel or change the date of my flight from San Diego Intl. Airport (SAN) to El Nido (ENI)?
Typically, you can cancel or modify your SAN to ENI flight. However, there may be additional fees, especially if you booked over 24 hours ago. Double-check your itinerary for the airline’s fees and policies on flight changes, or if you need further information, go to our Customer Service portal.

Explore a world of travel with Expedia

*Available to One Key members.