$88 Cheap Flights from Jacksonville (JAX) to San Juan (SJU)

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Find available prices by choosing your travel dates.

Cheap Flights from Jacksonville to San Juan (JAX-SJU)

Prices were available within the past 7 days and start at $88 for one-way flights and $170 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

American Airlines
American Airlines
American Airlines
Delta
Delta
Frontier Airlines
Frontier Airlines
Frontier Airlines
Southwest Airlines
JetBlue Airways
Flights from Jacksonville (JAX) to San Juan (SJU)
Origin airport
Jacksonville Intl.
Destination airport
Luis Munoz Marin Intl.
Airlines serving
American Airlines, Delta, Frontier Airlines, JetBlue Airways, Southwest Airlines, United
Roundtrip price
$169
Distance
1287 mi

Jacksonville to San Juan Flights

The cheapest times to fly from Jacksonville to San Juan

On average, Thursday can be the cheapest time to fly, according to data from the Airlines Reporting Corporation (ARC), one of the world's biggest databases for global airline sales. The data reveals that you could save up to 16% by flying on a Thursday—the cheapest day to travel on average—instead of a Sunday—the most expensive. Some of the most affordable flights from Jacksonville to San Juan are during the month of May. You can find some of the cheapest flights from Jacksonville to San Juan with Expedia's search tool and vast selection of airlines.

The best time to book a flight from Jacksonville to San Juan

Sunday is one of the best days to book for cheap flights from Jacksonville to San Juan: Tickets reserved on a Sunday cost between 6% and 13% less than those reserved on a Friday, according to ARC data. The data also suggests booking early can also lead to cheaper airfares. You could save 24% by buying your tickets for domestic flights at least a month in advance and 10% by booking international flights 2 months in advance.

How to find cheap round-trip tickets from Jacksonville to San Juan

Being flexible with your dates and using Expedia's Price Drop Protection and Price Tracking features are some of the best ways of finding a cheap ticket from Jacksonville to San Juan in 2025. You can also book with separate airlines for your outbound and return journeys, from $88 one-way. Expedia also offers Price Drop Protection, so if the cost of your airfare goes down after booking, you'll receive a credit for the difference*. This is available for a small fee, and is free to One Key Gold and Platinum tier members.

Expedia's Price Tracking feature means you can stay on top of airfares without manually checking every day. It sends you automated price alerts for cheap Jacksonville to San Juan flights and uses historical data to indicate when the best time to book is. Download Expedia's free app to activate this handy tool in a few easy taps.

You could also save big by booking one of Expedia's vacation packages. Bundling together your Jacksonville to San Juan airfare with your accommodations and car rental is often cheaper than booking everything separately. There’s also One Key, Expedia's generous rewards program. Join for free and you could earn One Key cash on most bookings to save on future adventures.

*Terms apply.

Disclaimer: ARC The statistics are based on average round-trip ticket prices between January and August 2023. The percentages you see are averages.

Frequently asked questions

How long does it take to fly from Jacksonville Intl. Airport to Luis Munoz Marin Intl. Airport (SJU)?
Frontier Airlines operates a direct flight jetting off from Jacksonville Intl. Airport at 9:41AM and arriving at SJU at 12:42PM — a total flight time of 3 hours and 1 minute. Lock in the best seat available, bring a magazine to keep you amused and the time will rush by.
Is it cheaper to buy a plane ticket from JAX to Luis Munoz Marin Intl. Airport (SJU) last minute?
Being the spontaneous type is a terrific way to travel the world, but it’s not always the wisest method to get your hands on a bargain airfare. It’s better to book your Jacksonville Intl. Airport to Isla Verde Intl. Airport journey well ahead of time instead of leaving it to the last minute. Based on flight pricing and demand studies in 2022, we have found that the best time to book domestic flights is between 28 – 35 days ahead of the departure date, and international flights three to four months in advance. Leave your spontaneity for when you’re discovering Isla Verde Intl. Airport!
What airports do you fly into for San Juan from Jacksonville?
From Jacksonville, you can journey to San Juan via Luis Munoz Marin Intl. Airport (SJU), Antonio Rivera Rodriguez Airport (VQS) and Mercedita Airport (PSE). It’s wise to check which terminal is right for you before making your decision. If you decide to land at Luis Munoz Marin Intl. Airport (SJU), it’s about 7 mi east of downtown. Use the money you save when booking your seat with Expedia to discover the city’s well-known sights, such as San Juan Gate and La Fortaleza.
What are the most popular departure times for flights from Jacksonville Intl. Airport to Isla Verde Intl. Airport?
Between 9:00 AM - 10:00 AM is the busiest period for Frontier Airlines flights going from Jacksonville Intl. Airport to Luis Munoz Marin Intl. Airport (SJU). Our useful tip? Get up and away earlier in the day. With air traffic yet to build up around airports, your chances of catching a delay-free flight are better.
Can I change the date of my flight from Jacksonville Intl. Airport (JAX) to SJU?
Quickly make changes to your JAX to SJU flight via the Expedia Trips portal. But before doing so, browse the conditions and rules in your itinerary to find out what the airline will allow you to do and if fees apply. Some carriers charge a change fee per person, in addition to any difference in airfares. However, if you booked in the last 24 hours, you may be able to cancel for free and organize new flights. You can also take a look at our Customer Service portal for more useful advice and to connect with our Virtual Agent.

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