Find all hotels by Independent in Boothbay Harbor, ME from $74
- Plan, book, stay with confidence
Be picky
Search almost a million properties worldwide
Change your mind
Book hotels with free cancellation
Check prices for these dates
Compare rooms and suites by Independent in Boothbay Harbor with rates, reviews, and availability. Most hotels are fully refundable.

The Brunswick Hotel
The Brunswick Hotel
9.2 out of 10, Wonderful, (774)

The Federal
The Federal
9.6 out of 10, Exceptional, (443)
The price is $147
includes taxes & fees
$135 per night
Mar 2 - Mar 3

Tugboat Inn
Tugboat Inn
9.0 out of 10, Wonderful, (1000)

Travelers Inn
Travelers Inn
9.0 out of 10, Wonderful, (1000)
The price is $74
includes taxes & fees
$68 per night
Mar 18 - Mar 19

Flagship Inn and Suites
Flagship Inn and Suites
8.2 out of 10, Very Good, (1000)
The price is $132
includes taxes & fees
$121 per night
Mar 23 - Mar 24

Ocean Gate Resort
Ocean Gate Resort
8.6 out of 10, Excellent, (1000)

Moonlight Inn
Moonlight Inn
7.6 out of 10, Good, (642)
The price is $97
includes taxes & fees
$89 per night
Feb 23 - Feb 24

OneSixtyFive
OneSixtyFive
9.4 out of 10, Exceptional, (114)
The price is $162
includes taxes & fees
$149 per night
Feb 25 - Feb 26
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Save an average of 15% on thousands of hotels when you're signed in
Find out more about Boothbay Harbor
Find out more about Boothbay Harbor
Independent Boothbay Harbor Hotel Guide
Some globe-trotters choose hotels based on location, but others book by name. And thanks to Expedia you don’t have to pick. It is why we offer such an expansive range of Independent hotels in Boothbay Harbor, Maine. Known for well-appointed rooms and friendly, personalized service, each of the top Independent Boothbay Harbor hotels guarantees an unparalleled level of comfort and quality.
You’ll find best-in-class amenities like clean rooms and quiet atmospheres, and some Boothbay Harbor Independent locations may even offer extra little benefits and discounts for frequent travelers.
Recent reviews of Boothbay Harbor hotels
Recent reviews of Boothbay Harbor hotels

Tugboat Inn
5/5 Excellent
"Absolutely loved our stay with recommend this hotel to anyone! The staff for supportive and helpful and the location was absolutely beautiful"
A verified traveler stayed at Tugboat Inn
Posted 13 days ago
Explore a world of travel with Expedia
Explore a world of travel with Expedia
Hotels near popular Boothbay Harbor Attractions
- Hotels near Boothbay Harbor Marina
- Hotels near Opera House at Boothbay Harbor
- Hotels near Burnt Island Living Lighthouse
- Hotels near Barrett Park
- Hotels near Boothbay Harbor Memorial Library
- Hotels near Boothbay Region Land Trust
- Hotels near Carousel Music Theater
- Hotels near Fisherman's Memorial Park
- Hotels near Boothbay Region Historical Society Museum
- Hotels near Acadia National Park
More Hotel Options in Boothbay Harbor
- Beach Hotels in Boothbay Harbor
- Business Hotels in Boothbay Harbor
- Cheap Hotels in Boothbay Harbor
- Family Hotels in Boothbay Harbor
- Fishing Resorts & Hotels in Boothbay Harbor
- Golf Hotels in Boothbay Harbor
- Historic Hotels in Boothbay Harbor
- Hotel Wedding Venues in Boothbay Harbor
- Hotels & Resorts for Couples in Boothbay Harbor
- Hotels with Air Conditioning in Boothbay Harbor
- Hotels with Balconies in Boothbay Harbor
- Hotels with Bars in Boothbay Harbor
- Hotels with Connecting Rooms in Boothbay Harbor
- Hotels with Fireplaces in Boothbay Harbor
- Hotels with Free Breakfast in Boothbay Harbor
- Hotels with Free Parking in Boothbay Harbor
- Hotels with Free Wifi in Boothbay Harbor
- Hotels with Hot Tubs in Boothbay Harbor
- Hotels with Laundry Facilities in Boothbay Harbor
- Hotels with Restaurants in Boothbay Harbor
- Hotels with Tennis Courts in Boothbay Harbor
- Hotels with a Gym in Boothbay Harbor
- Hotels with a Pool in Boothbay Harbor
- Hotels with a View in Boothbay Harbor
- Hotels with an Outdoor Pool in Boothbay Harbor
- Luxury Hotels in Boothbay Harbor
- Non-Smoking Hotels in Boothbay Harbor
- Oceanfront Hotels in Boothbay Harbor
- Pet-friendly Hotels in Boothbay Harbor
- Quiet Resorts & Hotels in Boothbay Harbor
- Resorts & Hotels with Spas in Boothbay Harbor
- Romantic Hotels in Boothbay Harbor
More Accommodation Types in Boothbay Harbor
Explore more hotels
- Waterfront Log Cabin Private Community Beach. CLOSEST TO TOWN less 10 min walk!
- Harborage Inn on the Oceanfront
- Appalachee Pond Waterfront Cottage | Decks, Sunroom, Dock with Kayaks & Canoe
- Admirals Quarters Inn
- Dog-friendly home with deck, pool table, & firepit - walk to downtown Boothbay
- Beautifully renovated home w/ prime location - walk to the footbridge & downtown
- Newly Renovated Haven w/ Deck, Near Downtown: Walk to Shops, Dining & Marina
- Boothbay Harbor Cabin w/ Spacious Deck & Yard!
- Newly renovated 3 bedroom, 2 bath bungalow, walking distance to downtown.
- Bayfront cottage with fantastic views & minutes to downtown - dog-friendly
- Charming Remodeled Home with Deck overlooking Land Trust - Dog Friendly!
- Coastal bungalow with large yard, beautiful kitchen, & great location
- Peaceful Lake Waterfront! Automatic backup Generator! Full Kitchen! Heat & A/C
- Enjoy spectacular views of Lobster Cove. Large yard, EV charger & dog friendly.
- Coastal charmer with screened-in porch, grill, & AC
- The Sea Eagle - Luxury 5 BR Waterfront Home in Boothbay Harbor with private dock
- Beautiful Harbor Views Heart of Boothbay Harbor Downtown Village near all Piers
- Iconic downtown retreat with firepit & fireplace- walk to Harbor Footbridge
- Amazing All-Season Sprucewold Cabin w/ Private Beach Club Access
- Two separate dog-friendly homes with water views & Linekin Bay Resort access
Expedia's Latest Trends
Hotels
Hotels in KennebunkportHotels in WatervilleBar Harbor Oceanfront HotelsHotels in EllsworthHotels in Bar HarborHotels in KitteryOgunquit Oceanfront HotelsHotels in YorkHotels in OgunquitHotels in BrunswickOld Orchard Beach Oceanfront HotelsHotels in BangorHotels in CamdenPortland Oceanfront HotelsHotels in PortlandHotels in WellsHotels in Old Orchard BeachYork Beach Oceanfront HotelsHotels in FreeportPortland Cheap HotelsHotels in AugustaHotels in South PortlandHotels in RocklandHotels in Belfast
General